Package ubic.basecode.ontology.ncbo

Class OmimAnnotatorClient

java.lang.Object

ubic.basecode.ontology.ncbo.OmimAnnotatorClient

public class OmimAnnotatorClient
extends Object

to use the OMIM api TODO Document Me

Author:

Nicolas

Constructor Summary

Constructors

Constructor	Description
OmimAnnotatorClient()

Method Summary

Modifier and Type	Method	Description
static Map<Long,Collection<Long>>	findLinkedPublications(Collection<Long> omimIds, Map<Long,Collection<Long>> mimToPubmeds)	Giving a set of OMIM id return for each id its list of related publication

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

OmimAnnotatorClient

public OmimAnnotatorClient()

Method Details

findLinkedPublications

public static Map<Long,Collection<Long>> findLinkedPublications(Collection<Long> omimIds,
 Map<Long,Collection<Long>> mimToPubmeds)
                                                         throws InterruptedException

Giving a set of OMIM id return for each id its list of related publication

Parameters:

omimIds - the omimIds we want to find the publication

mimToPubmeds - the results, pass by reference for multiple calls, limit of size 10

Throws:

InterruptedException