Package ubic.basecode.util.r
Class JRIClientTest
- java.lang.Object
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- ubic.basecode.util.r.AbstractRClientTest
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- ubic.basecode.util.r.JRIClientTest
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public class JRIClientTest extends AbstractRClientTest
For this test to work, you need to have R installed, the R_HOME environment variable set and rJava installed with the JRI library.- Author:
- pavlidis
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Field Summary
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Fields inherited from class ubic.basecode.util.r.AbstractRClientTest
log
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Constructor Summary
Constructors Constructor Description JRIClientTest()
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Method Summary
All Methods Static Methods Instance Methods Concrete Methods Modifier and Type Method Description static voidcheckRHome()protected AbstractRClientcreateRClient()-
Methods inherited from class ubic.basecode.util.r.AbstractRClientTest
setUp, tearDown, testAnovaA, testAnovaB, testAnovaC, testAnovaD, testAnovaE, testAnovaF, testAssignAndRetrieveMatrix, testAssignAndRetrieveMatrixB, testAssignAndRetrieveMatrixC, testAssignAndRetrieveMatrixD, testAssignStringList, testDataFrameA, testDoubleArrayTwoDoubleArrayEval, testDoubleTwoDoubleArrayEval, testExec, testExecDoubleArray, testExecError, testFactorAssign, testFindExecutable, testLimmaA, testLinearModelA, testLinearModelB, testLinearModelC, testLinearModelD, testListEvalA, testListEvalB, testLoadLibrary, testLoadScript, testStringListEval, testStringListEvalB, testTTest, testTTestFail
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Method Detail
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checkRHome
public static void checkRHome()
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createRClient
protected AbstractRClient createRClient()
- Specified by:
createRClientin classAbstractRClientTest
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