Package ubic.basecode.dataStructure.matrix

Class AbstractDoubleMatrixTest

java.lang.Object

ubic.basecode.dataStructure.matrix.AbstractDoubleMatrixTest

Direct Known Subclasses:

CompressedSparseDoubleMatrixTest, DenseDoubleMatrixTest, FastRowAccessDoubleMatrixTest

public abstract class AbstractDoubleMatrixTest
extends Object

TODO Document Me

Author:

Paul

Field Summary

Fields

Modifier and Type	Field	Description
protected DoubleMatrixReader	f
protected double[][]	testArray
protected DoubleMatrix<String,String>	testdata
protected DoubleMatrix<String,String>	testM

Constructor Summary

Constructors

Constructor	Description
AbstractDoubleMatrixTest()

Method Summary

Modifier and Type	Method	Description
void	testColumns()
void	testCopy()
void	testGet()
void	testGet2()	Test method for DenseDoubleMatrix.get(int, int).
void	testGetByKeys()	Test method for DoubleMatrix.getByKeys(Object, Object).
void	testGetColByName()	Test method for DenseDoubleMatrix.getColByName(java.lang.Object).
void	testGetColByNameFail()
void	testGetColByNameNull()
void	testGetColObj()
void	testGetColObj2()	Test method for DenseDoubleMatrix.getColObj(int).
void	testGetColRange()
void	testGetColumn()	Test method for DenseDoubleMatrix.getColumn(int).
void	testGetObject()	Test method for DenseDoubleMatrix.getObject(int, int).
void	testGetRow()
void	testGetRow2()	Test method for DenseDoubleMatrix.getRow(int).
void	testGetRowArrayList()
void	testGetRowArrayList2()	Test method for DenseDoubleMatrix.getRowArrayList(int).
void	testGetRowByName()	Test method for DenseDoubleMatrix.getRowByName(java.lang.Object).
void	testGetRowByNameFail()
void	testGetRowByNameNull()
void	testGetRowObj()
void	testGetRowObj2()	Test method for DenseDoubleMatrix.getRowObj(int).
void	testGetRowRange()
void	testIsMissing()
void	testIsMissing2()	Test method for DenseDoubleMatrix.isMissing(int, int).
void	testRows()
void	testRows2()	Test method for DenseDoubleMatrix.rows().
void	testSet()
void	testSet2()	Test method for ubic.basecode.dataStructure.matrix.DenseDoubleMatrix#set(int, int, double).
void	testSetIntIntDouble()
void	testSetIntIntObject()
void	testSize()
void	testSortByColumnAbsoluteValue()
void	testSubsetColumns()
void	testSubsetRows()
void	testToArray()
void	testToString()	Test method for DoubleMatrix.toString().
void	testViewColumn()
void	testViewRow()
void	testViewRow2()	Test method for DenseDoubleMatrix.viewRow(int).

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

f

protected DoubleMatrixReader f

testArray

protected double[][] testArray

testdata

protected DoubleMatrix<String,String> testdata

testM

protected DoubleMatrix<String,String> testM

Constructor Detail

AbstractDoubleMatrixTest

public AbstractDoubleMatrixTest()

Method Detail

testColumns

public void testColumns()

testCopy

public void testCopy()

testGet

public void testGet()

testGet2

public void testGet2()

Test method for DenseDoubleMatrix.get(int, int).

testGetByKeys

public void testGetByKeys()

Test method for DoubleMatrix.getByKeys(Object, Object).

testGetColByName

public void testGetColByName()

Test method for DenseDoubleMatrix.getColByName(java.lang.Object).

testGetColByNameFail

public void testGetColByNameFail()

testGetColByNameNull

public void testGetColByNameNull()

testGetColObj

public void testGetColObj()

testGetColObj2

public void testGetColObj2()

Test method for DenseDoubleMatrix.getColObj(int).

testGetColRange

public void testGetColRange()

testGetColumn

public void testGetColumn()

Test method for DenseDoubleMatrix.getColumn(int).

testGetObject

public void testGetObject()

Test method for DenseDoubleMatrix.getObject(int, int).

testGetRow

public void testGetRow()

testGetRow2

public void testGetRow2()

Test method for DenseDoubleMatrix.getRow(int).

testGetRowArrayList

public void testGetRowArrayList()

testGetRowArrayList2

public void testGetRowArrayList2()

Test method for DenseDoubleMatrix.getRowArrayList(int).

testGetRowByName

public void testGetRowByName()

Test method for DenseDoubleMatrix.getRowByName(java.lang.Object).

testGetRowByNameFail

public void testGetRowByNameFail()

testGetRowByNameNull

public void testGetRowByNameNull()

testGetRowObj

public void testGetRowObj()

testGetRowObj2

public void testGetRowObj2()

Test method for DenseDoubleMatrix.getRowObj(int).

testGetRowRange

public void testGetRowRange()

testIsMissing

public void testIsMissing()
                   throws Exception

Throws:

Exception

testIsMissing2

public void testIsMissing2()

Test method for DenseDoubleMatrix.isMissing(int, int).

testRows

public void testRows()

testRows2

public void testRows2()

Test method for DenseDoubleMatrix.rows().

testSet

public void testSet()

testSet2

public void testSet2()

Test method for ubic.basecode.dataStructure.matrix.DenseDoubleMatrix#set(int, int, double).

testSetIntIntDouble

public void testSetIntIntDouble()

testSetIntIntObject

public void testSetIntIntObject()

testSize

public void testSize()

testSortByColumnAbsoluteValue

public void testSortByColumnAbsoluteValue()

testSubsetColumns

public void testSubsetColumns()

testSubsetRows

public void testSubsetRows()

testToArray

public void testToArray()

testToString

public void testToString()

Test method for DoubleMatrix.toString().

testViewColumn

public void testViewColumn()

testViewRow

public void testViewRow()

testViewRow2

public void testViewRow2()

Test method for DenseDoubleMatrix.viewRow(int).