Package ubic.basecode.ontology.jena

Class OntologyLoader

java.lang.Object

ubic.basecode.ontology.jena.OntologyLoader

public class OntologyLoader
extends Object

Reads ontologies from OWL resources

Author:

paul

Constructor Summary

Constructors

Constructor	Description
OntologyLoader()

Method Summary

Modifier and Type	Method	Description
static void	deleteOldCache(String cacheName)
static File	getDiskCachePath(String name)	Obtain the path for the ontology cache.
static boolean	hasChanged(String cacheName)
static com.hp.hpl.jena.ontology.OntModel	loadMemoryModel(InputStream is, String url)
static com.hp.hpl.jena.ontology.OntModel	loadMemoryModel(InputStream is, String url, boolean processImports)	Load an ontology into memory.
static com.hp.hpl.jena.ontology.OntModel	loadMemoryModel(String url)	Load an ontology into memory.
static com.hp.hpl.jena.ontology.OntModel	loadMemoryModel(String url, String cacheName)
static com.hp.hpl.jena.ontology.OntModel	loadMemoryModel(String url, String cacheName, boolean processImports)	Load an ontology into memory.
static URLConnection	openConnection(String url)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

OntologyLoader

public OntologyLoader()

Method Detail

loadMemoryModel

public static com.hp.hpl.jena.ontology.OntModel loadMemoryModel(InputStream is,
                                                                String url)

loadMemoryModel

public static com.hp.hpl.jena.ontology.OntModel loadMemoryModel(InputStream is,
                                                                String url,
                                                                boolean processImports)

Load an ontology into memory. Use this type of model when fast access is critical and memory is available.

loadMemoryModel

public static com.hp.hpl.jena.ontology.OntModel loadMemoryModel(String url)

Load an ontology into memory. Use this type of model when fast access is critical and memory is available.

See Also:

loadMemoryModel(String, String, boolean)

loadMemoryModel

public static com.hp.hpl.jena.ontology.OntModel loadMemoryModel(String url,
                                                                @Nullable
                                                                String cacheName)

loadMemoryModel

public static com.hp.hpl.jena.ontology.OntModel loadMemoryModel(String url,
                                                                @Nullable
                                                                String cacheName,
                                                                boolean processImports)

Load an ontology into memory. Use this type of model when fast access is critical and memory is available. If load from URL fails, attempt to load from disk cache under @cacheName.

Uses OntModelSpec.OWL_MEM_TRANS_INF.

Parameters:

url - a URL where the OWL file is stored

cacheName - unique name of this ontology, will be used to load from disk in case of failed url connection

hasChanged

public static boolean hasChanged(String cacheName)

deleteOldCache

public static void deleteOldCache(String cacheName)
                           throws IOException

Throws:

IOException

openConnection

public static URLConnection openConnection(String url)
                                    throws IOException

Throws:

IOException

getDiskCachePath

public static File getDiskCachePath(String name)

Obtain the path for the ontology cache.