Package ubic.basecode.math

Class CorrelationStatsTest

  • public class CorrelationStatsTest
extends Object
    Most benchmarks come from R, using things like cor.test(rnorm(50), rnorm(50), method="spearman", alternative="two.sided"),

    OR (where the first argument is n, second is S (rounded off) 

     1-.C("prho",as.integer(10),as.double(4),double(1),integer(1),as.logical(FALSE),PACKAGE="stats")[[3]]
    Author:
    paul

    • Constructor Detail

      • CorrelationStatsTest

        public CorrelationStatsTest()

    • Method Detail

      • testCorrel

        public void testCorrel()

      • testCorrelAsByte

        public void testCorrelAsByte()

      • testCorrelationForPvalue

        public void testCorrelationForPvalue()

      • testCorrelTooSmall

        public void testCorrelTooSmall()

      • testInverseFisherTransform

        public void testInverseFisherTransform()

      • testPvalue

        public void testPvalue()

      • testSpearmanPvalueA

        public void testSpearmanPvalueA()

      • testSpearmanPvalueA2

        public void testSpearmanPvalueA2()

      • testSpearmanPvalueB

        public void testSpearmanPvalueB()

      • testSpearmanPvalueD

        public void testSpearmanPvalueD()

      • testSpearmanPvalueD2

        public void testSpearmanPvalueD2()

      • testSpearmanPvalueE

        public void testSpearmanPvalueE()

      • testSpearmanPvalueEh

        public void testSpearmanPvalueEh()

      • testSpearmanPvalueEm

        public void testSpearmanPvalueEm()

      • testSpearmanPvalueF

        public void testSpearmanPvalueF()

      • testSpearmanPvalueG

        public void testSpearmanPvalueG()

      • testSpearmanPvalueG2

        public void testSpearmanPvalueG2()

      • testSpearmanPvalueTDist

        public void testSpearmanPvalueTDist()